PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284140.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 296aa    MW: 32657.7 Da    PI: 8.69
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284140.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.43.4e-3389145360
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                      +rY+eClkNhAas+Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+ev+ e
  XP_021284140.1  89 VIRYRECLKNHAASIGGNVYDGCGEFMPS-GEEGTLEALKCAACDCHRNFHRKEVDGE 145
                     689*************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MEVRGQEHDI KAPGSSGFGH HSPGADRRRD GNHNGTAVLT CTQTLDHVHR PQRQQSLGQG  60
RSPHPDRVTV SGAAVAPISV SSNTKPSSVI RYRECLKNHA ASIGGNVYDG CGEFMPSGEE  120
GTLEALKCAA CDCHRNFHRK EVDGESQFGP NSGRRSLMLN PLQLPPPLPS PTMLHHHQRY  180
SVHTSPSSAM VAPMNVAFGS VGGGGTESSS EDLMFQSNAE GMPPPPPYVL SKKRFRTKFT  240
QEQKDKMLEF AEKLGWRINK QDEEEVEKFC AEVGVKRQVF KVWMHNNKNV KKQPQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.11e-67ZF-HD family protein