PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283811.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 266aa MW: 29855.7 Da PI: 7.451 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.9 | 4.2e-19 | 122 | 176 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Le+ F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k XP_021283811.1 122 RKKLRLSKEQSAILEDSFKEHSTLNPKQKQLLAEQLNLRPRQVEVWFQNRRARTK 176 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 123.4 | 1.1e-39 | 122 | 210 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rlskeq+++LE+sF+e+++L+p++K+ la++L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++l+een+rL+ke +eL+ + XP_021283811.1 122 RKKLRLSKEQSAILEDSFKEHSTLNPKQKQLLAEQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTEENKRLQKELQELK-S 210 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MGFDDVCNTG LGLGLGCLVK QEQFSQSDHQ QKKKKLFLKH DHFFPSLTLG PSDDIYQSAT 60 KIDASKAHGE SIDLHQQTSS LSAVSSFSNS SVKRERDFGG EEVELERVSS RVSDEDEEGS 120 PRKKLRLSKE QSAILEDSFK EHSTLNPKQK QLLAEQLNLR PRQVEVWFQN RRARTKLKQT 180 EVDCELLKKC CETLTEENKR LQKELQELKS LKLTASYCMQ LPAATLTMCP SCERVASGGE 240 GPSTSPFTIG QKSHFFNPFT HPSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 171 | 179 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 2e-63 | HD-ZIP family protein |