PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283674.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | TCP | ||||||||
Protein Properties | Length: 460aa MW: 49429 Da PI: 7.9576 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 117.7 | 1.5e-36 | 160 | 266 | 2 | 90 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssaseceaesss 79 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt ++ssa++++++ XP_021283674.1 160 TAKRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTgtvpaiavsvggtlkipTTSSANASNNN--- 251 789*************************************************************5555555555554444333333222111... PP TCP 80 ssasnsssg......ka 90 +s++n+ + k+ XP_021283674.1 252 NSNNNN--QiddgaiKK 266 111111..122322221 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 460 aa Download sequence |
MVLFCPFALF LITLLLLLIF VEIFPFVHFH VYRFIILRVL TSSPFPDRNE SQENFPLVPW 60 QKSNTTQFRD MDPDDDGGTS DLSTSAGEPN TSTAATANNK NNDKNCENSA HPLMPLKEEP 120 IDSDPDHKTH PSPPIGVVPV AMQIQQMPMQ IPAMPMPVST AKRSSTKDRH TKVEGRGRRI 180 RIPATCAARI FQLTRELGHK SDGETVRWLL EHAEQAIIEA TGTGTVPAIA VSVGGTLKIP 240 TTSSANASNN NNSNNNNQID DGAIKKRKRP ANSEFCDISD GIPFAVSQSQ QQLVTQASGL 300 APVTPQGVVP VWAVGNTGMM VPANAFWMIP QPAATAAGNG LTNQQPSPQM WTLSPSLTPV 360 FNVAARPISS FVATTNQVQA VVCNGLSTLA LNTSSTPVGA TVAKKSTMAP SVSSGGNGSG 420 STGGKPQLLR DFSLEIYDKQ ELQFMGRSGN HHQQMQASKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 2e-64 | TCP family protein |