PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021279067.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 361aa    MW: 40034.3 Da    PI: 4.4941
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021279067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19130179255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ kl+g
  XP_021279067.1 130 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 179
                     89*******.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MDHSILCPIK YTEHKNVTKI FRKPSLKPKK TSSDHDRTHN NTTPDVPRIV RVSVTDPDAT  60
DSSSDEEADL FGRQRVKRYV NEINIEATCK NTATTTVSNT NRKRTAAAAN VTTACRRPLK  120
LSSSNGNGRK FRGVRQRPWG KWAAEIRDPA RRVRLWLGTY DTAEEAAMVY DNAAIKLRGP  180
DALTNFVTPP AKENMEKPEN IIVASVSGYE SGDESSHNLS SPTSVLNFRT QSSEETAVEP  240
ENPVQELQEE ESKPPPVQEQ VVLSECQGET GTTLPDDSGD YLPLDFPFLD EFFNIPVPGL  300
SLFDDTATIL PESSVFSEDF SNMLLDTPQD FGCSSSSSIS QVDDYFEDIG DLFFSDPLVA  360
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-58ERF family protein