PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021278949.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 163aa    MW: 17787.7 Da    PI: 9.5417
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021278949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000433860123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C+ C+k+Fs+   L  H  +H
  XP_021278949.1 38 FACKTCNKRFSSFQALGGHRASH 60
                    78**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MTMKRGRDIE AMDMANCLML LSKVGQTDPS MHFQGRVFAC KTCNKRFSSF QALGGHRASH  60
KKPRLGGGDN LSEMPASPKK PKTHECSICG LEFAIGQALG GHMRRHRAAS NEGLVTRDLL  120
PEMKKSRDAE SDLCLDLNLA PWGSDLGLKV GKVVPAPVVH CFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.15e-42C2H2 family protein