PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021276812.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 202aa    MW: 22232.2 Da    PI: 9.3945
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021276812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.5e-18655255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  XP_021276812.1  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAILMNG 55
                    89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MVQTRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILMNGQNAKT  60
NFPVAKTDQP GDTNARGDDS PLPPKALSEL LNAKLRKCCK DQSPSLTCLR LDTDNSHIGV  120
WQKRAGTRSS SNWVMRVELG NKKAPALLED GSALTSGSGS SSPMANEIEA RSVMGEEDRI  180
AMQMIEELLN WNCPMTSSSG GV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.11e-76ERF family protein