PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN26430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | GRAS | ||||||||
Protein Properties | Length: 436aa MW: 49668.5 Da PI: 5.0309 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 312.1 | 1.2e-95 | 58 | 435 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 +lL +cA a+s++d +++++lL+ l+el+sp+gd q+laayf++AL + ++s+ ++y++l + ++++++ +++ + f+evsP+ +f+h++ N a PIN26430.1 58 KLLKDCAAAMSEKDSNKIHHLLWMLNELSSPYGDCDQKLAAYFLQALFCKATDSGRRCYQTLISVAEKSHSFDSVRKLILKFQEVSPWTTFGHVASNGA 156 7899**********************************************************8888775555555555555****************** PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpg 199 +lea+ege++vHiiD++ + ++QWp+Ll+aLa+R++++p l++T+v+ +s k ++e+ r++kfA+ +gvpfef+v+ +rl +l+ e+L v+++ PIN26430.1 157 MLEALEGEQKVHIIDISNTLCTQWPTLLEALATRSDETPFLKLTVVVT-TSIVKSVMKEITPRMEKFARLMGVPFEFKVMtGLNRLGELTKESLGVQED 254 ************************************************.6679**************************94456*************** PP GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhns..esFlerflealeyysalfdsleaklpreseerikvErellgreivn 296 Eala+n++ +l r+ +er+ vL++++sl+Pkvv++ve+ead +s +F++ f e+l++y+ fd+le+++ ++s+e+ ++Ere +r+iv PIN26430.1 255 EALAINCIGALRRVD------VDERRGVLEMIQSLRPKVVTIVEEEADFSSfrDDFVKCFEECLRFYTIYFDMLEESFTPTSNEKLMLERE-CSRSIVR 346 *************96......444889********************99652269************************************.89***** PP GRAS 297 vvacega........errerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve..ee.sgslvlgWkdrpLvsvSaWr 374 v+ac + er+e+ +W++rl+e+GF+p+++s+++++++k+ll+++ ++ ++ e+ ++ ++l Wk++p+v++S+W+ PIN26430.1 347 VLACDDElddhdqygGDSERREKGIQWSKRLRESGFSPIRYSDDVVDDVKALLKRYRvGW-SLIQsrEDdHEGIYLAWKEEPVVWASVWK 435 ****764222211112479**************************************533.33333344266666**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 436 aa Download sequence |
MDRTSFTSKE PMFLHTITNP KNNGLQPEFH PKSQSNSLSA GCSSDSGEAA ADEKWASKLL 60 KDCAAAMSEK DSNKIHHLLW MLNELSSPYG DCDQKLAAYF LQALFCKATD SGRRCYQTLI 120 SVAEKSHSFD SVRKLILKFQ EVSPWTTFGH VASNGAMLEA LEGEQKVHII DISNTLCTQW 180 PTLLEALATR SDETPFLKLT VVVTTSIVKS VMKEITPRME KFARLMGVPF EFKVMTGLNR 240 LGELTKESLG VQEDEALAIN CIGALRRVDV DERRGVLEMI QSLRPKVVTI VEEEADFSSF 300 RDDFVKCFEE CLRFYTIYFD MLEESFTPTS NEKLMLEREC SRSIVRVLAC DDELDDHDQY 360 GGDSERREKG IQWSKRLRES GFSPIRYSDD VVDDVKALLK RYRVGWSLIQ SREDDHEGIY 420 LAWKEEPVVW ASVWKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 1e-135 | GRAS family protein |