PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26430.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 436aa    MW: 49668.5 Da    PI: 5.0309
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS312.11.2e-95584353374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL +cA a+s++d +++++lL+ l+el+sp+gd  q+laayf++AL  + ++s+ ++y++l + ++++++ +++ +    f+evsP+ +f+h++ N a
  PIN26430.1  58 KLLKDCAAAMSEKDSNKIHHLLWMLNELSSPYGDCDQKLAAYFLQALFCKATDSGRRCYQTLISVAEKSHSFDSVRKLILKFQEVSPWTTFGHVASNGA 156
                 7899**********************************************************8888775555555555555****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpg 199
                 +lea+ege++vHiiD++ + ++QWp+Ll+aLa+R++++p l++T+v+  +s  k  ++e+  r++kfA+ +gvpfef+v+   +rl +l+ e+L v+++
  PIN26430.1 157 MLEALEGEQKVHIIDISNTLCTQWPTLLEALATRSDETPFLKLTVVVT-TSIVKSVMKEITPRMEKFARLMGVPFEFKVMtGLNRLGELTKESLGVQED 254
                 ************************************************.6679**************************94456*************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhns..esFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 Eala+n++ +l r+        +er+ vL++++sl+Pkvv++ve+ead +s   +F++ f e+l++y+  fd+le+++ ++s+e+ ++Ere  +r+iv 
  PIN26430.1 255 EALAINCIGALRRVD------VDERRGVLEMIQSLRPKVVTIVEEEADFSSfrDDFVKCFEECLRFYTIYFDMLEESFTPTSNEKLMLERE-CSRSIVR 346
                 *************96......444889********************99652269************************************.89***** PP

        GRAS 297 vvacega........errerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve..ee.sgslvlgWkdrpLvsvSaWr 374
                 v+ac  +           er+e+  +W++rl+e+GF+p+++s+++++++k+ll+++  ++   ++  e+ ++ ++l Wk++p+v++S+W+
  PIN26430.1 347 VLACDDElddhdqygGDSERREKGIQWSKRLRESGFSPIRYSDDVVDDVKALLKRYRvGW-SLIQsrEDdHEGIYLAWKEEPVVWASVWK 435
                 ****764222211112479**************************************533.33333344266666**************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MDRTSFTSKE PMFLHTITNP KNNGLQPEFH PKSQSNSLSA GCSSDSGEAA ADEKWASKLL  60
KDCAAAMSEK DSNKIHHLLW MLNELSSPYG DCDQKLAAYF LQALFCKATD SGRRCYQTLI  120
SVAEKSHSFD SVRKLILKFQ EVSPWTTFGH VASNGAMLEA LEGEQKVHII DISNTLCTQW  180
PTLLEALATR SDETPFLKLT VVVTTSIVKS VMKEITPRME KFARLMGVPF EFKVMTGLNR  240
LGELTKESLG VQEDEALAIN CIGALRRVDV DERRGVLEMI QSLRPKVVTI VEEEADFSSF  300
RDDFVKCFEE CLRFYTIYFD MLEESFTPTS NEKLMLEREC SRSIVRVLAC DDELDDHDQY  360
GGDSERREKG IQWSKRLRES GFSPIRYSDD VVDDVKALLK RYRVGWSLIQ SREDDHEGIY  420
LAWKEEPVVW ASVWKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-135GRAS family protein