PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN25984.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 229aa MW: 25454.8 Da PI: 5.9257 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.6 | 6e-20 | 76 | 130 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq ++Lee F +n++++ +e+e LA +l+L+ rqV vWFqNrRa+ k PIN25984.1 76 RKKLRLTKEQSRVLEETFIQNHTLNPKEKEALAVELKLKPRQVEVWFQNRRARSK 130 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 110.3 | 1.3e-35 | 76 | 164 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq+++LEe+F ++++L+p++K++la eL+l+prqv+vWFqnrRAR k+k +E++ye+Lk+ +l+e+n+rL+keveeLr+ PIN25984.1 76 RKKLRLTKEQSRVLEETFIQNHTLNPKEKEALAVELKLKPRQVEVWFQNRRARSKMKLMEMEYEYLKKLSGTLTEQNRRLKKEVEELRA 164 69*************************************************************************************94 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MEIFPNNSTC LELTIAVPGF NSSQPFPSSG EISGGGAMKA LDINQAPSGT EEECMEEEEE 60 DDESPNNNNN GGPAPRKKLR LTKEQSRVLE ETFIQNHTLN PKEKEALAVE LKLKPRQVEV 120 WFQNRRARSK MKLMEMEYEY LKKLSGTLTE QNRRLKKEVE ELRALTVAPP HSRQPMPSST 180 ITMCPCCERV TTTTALDKGP ATSTSAAAAT SAAKMSFLQQ RQPSATCYN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 3e-61 | HD-ZIP family protein |