PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25568.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 669aa MW: 72797.9 Da PI: 5.9585

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.6e-12	490	535	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L PIN25568.1 490 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAIAYINEL 535 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MIEYRLPTTS IESTQMNIWS GNSVAATATT AEGDASMMDA FMSSASDLSS FWPSSVVTQQ 60 SAYSQTPAHA PAADHSKTSS SSAAAAAAAQ FFNQETLQQR LLALIEGARE SWTYAIFWQS 120 SVLDHGGPSV LGWGDGYYKG EENKSKRQTA SSPAEQEHRK KILRELNSLI SGPQATADDA 180 VDEEVTDTEW FFLISMTQSF VNGSGLPGQA LYSSSPIWVT GPERLSASHC ERTRQAQGFG 240 IQTLVCIPSS NGVVELGSTE LIFQNSDLMN KVRVLFNFNG LDMGSGSGSG SWAFAENDPS 300 ALWLTDPSSS VVDMKDSLNN NNSSNNHNSN GKQMMLSNEN PSSSTITENP QLQTQGFVNF 360 SGFNGSSRNS ATCKRESGEI LNFGESTKRS ASSGNGNLFG SQDDDNNKHK KRSATSRGSN 420 EEGMLSFTSG VILPSSGILK NDNIGGVESD HSDLEASVVK DVDSSRVVDP EKRPRKRGRK 480 PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNVSKMD KASLLGDAIA YINELKSKVQ 540 SVESDKEDLR SQLESLKKEL AMKESRTAPP PPPPERDSNL KTLGLGGNVD IDVKIIGLDA 600 MVRVQCSKKN HPAAKLMVAL RELNLDVHHA SVSVVNDFMI QQATVKMEGQ IYTQDHLRRA 660 LISKLAEIR

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MIEYRLPTTS IESTQMNIWS GNSVAATATT AEGDASMMDA FMSSASDLSS FWPSSVVTQQ  60
SAYSQTPAHA PAADHSKTSS SSAAAAAAAQ FFNQETLQQR LLALIEGARE SWTYAIFWQS  120
SVLDHGGPSV LGWGDGYYKG EENKSKRQTA SSPAEQEHRK KILRELNSLI SGPQATADDA  180
VDEEVTDTEW FFLISMTQSF VNGSGLPGQA LYSSSPIWVT GPERLSASHC ERTRQAQGFG  240
IQTLVCIPSS NGVVELGSTE LIFQNSDLMN KVRVLFNFNG LDMGSGSGSG SWAFAENDPS  300
ALWLTDPSSS VVDMKDSLNN NNSSNNHNSN GKQMMLSNEN PSSSTITENP QLQTQGFVNF  360
SGFNGSSRNS ATCKRESGEI LNFGESTKRS ASSGNGNLFG SQDDDNNKHK KRSATSRGSN  420
EEGMLSFTSG VILPSSGILK NDNIGGVESD HSDLEASVVK DVDSSRVVDP EKRPRKRGRK  480
PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNVSKMD KASLLGDAIA YINELKSKVQ  540
SVESDKEDLR SQLESLKKEL AMKESRTAPP PPPPERDSNL KTLGLGGNVD IDVKIIGLDA  600
MVRVQCSKKN HPAAKLMVAL RELNLDVHHA SVSVVNDFMI QQATVKMEGQ IYTQDHLRRA  660
LISKLAEIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	472	480	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-171	bHLH family protein