PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25478.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 508aa    MW: 56743.7 Da    PI: 6.9625
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS281.82e-861455063374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                   Ll+cAe v++++  +a +lL +  +++sp g+++qRla+yf eAL +++ r +++ +  l p e+     +     l ++++  P+++++ ++  q+
  PIN25478.1 145 VNLLSCAEKVDKEQYDRAVKLLDECYKMSSPIGSTIQRLAFYFIEALYEKVGRVTPKGV-CLDPLEA----IIWPNIPLLALHKGHPLPQITKFAGIQT 238
                 579**************************************************333322.2333332....334444445699**************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 Il+ v +++++H+iD++i  G+Q+  L+qaL +R++ p  +lRiT++g    +ske++eetg+rL +fAe+l+++f+f+vl++ ++ dl+ + ++v pg
  PIN25478.1 239 ILDHVVEARKIHVIDLEIRSGIQYTILFQALVDRSKHPVeHLRITALGT---KSKETMEETGKRLMSFAESLKISFSFDVLMVADVLDLKESLFKVVPG 334
                 ***********************************66655*********...68********************************************* PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                 E++aV  +++l+ l  +        +++++++k+l+P v++++e ea+++s+sF  rf+e+l +y a+fds++  + +++ +r+ vE+ +lg +i+nv+
  PIN25478.1 335 ETVAVYTAYALMGLGGKADR----LEHIMRVIKDLNPCVMIIAEIEANCSSPSFIGRFVESLFFYGAIFDSFADCMKNDETNRREVEATCLGSSIKNVL 429
                 **************955544....556************************************************************************ PP

        GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 a+eg+er+ rh + + Wr+ l ++G  +++ls + ++qa ++l+ ++ ++  +v+ + ++l++ Wk+ pL s+SaW+
  PIN25478.1 430 AAEGDERKIRHMSIRVWRAFLARFGIVEIELSMSCVDQAYMVLQGFPcGRSCTVDMNGKCLIIAWKGTPLSSLSAWK 506
                 ************************************************9***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
MPTNAENGND KFISQGTISL GVQELESFAT FCNLDDLYLG VISHQFQSFD DKIISVKPSN  60
TKEDYSASFH ILRKHKRKCP KLDENKAIVS SQNSIIPTLS TEAIIELAAE NFIQSASKSS  120
KELSVLNHPY SSSTLSHSKD VQLIVNLLSC AEKVDKEQYD RAVKLLDECY KMSSPIGSTI  180
QRLAFYFIEA LYEKVGRVTP KGVCLDPLEA IIWPNIPLLA LHKGHPLPQI TKFAGIQTIL  240
DHVVEARKIH VIDLEIRSGI QYTILFQALV DRSKHPVEHL RITALGTKSK ETMEETGKRL  300
MSFAESLKIS FSFDVLMVAD VLDLKESLFK VVPGETVAVY TAYALMGLGG KADRLEHIMR  360
VIKDLNPCVM IIAEIEANCS SPSFIGRFVE SLFFYGAIFD SFADCMKNDE TNRREVEATC  420
LGSSIKNVLA AEGDERKIRH MSIRVWRAFL ARFGIVEIEL SMSCVDQAYM VLQGFPCGRS  480
CTVDMNGKCL IIAWKGTPLS SLSAWKFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.19e-54GRAS family protein