PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25160.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Nin-like

Protein Properties

Length: 378aa MW: 42935.1 Da PI: 5.4634

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	76.1	4.1e-24	285	335	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++l+d + yF+lp++ AA++++vclTv+K+ CR++G+ RWPhRkiks+ PIN25160.1 285 TRKMKLKDFKDYFHLPMEVAAQKMNVCLTVMKKVCRKNGVLRWPHRKIKSI 335 67899********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MANDSSSIFT FHDPFEEIPA NDPSLSFFNE DPTLGSFELP FNVEQNPVSY PDHEPGLELN 60 GLFDSEDPLS DSFIWAFCND SEDDIAGNFQ AGHSGFPGEG CSSHGINENC NGSQNPVSGD 120 NSTPSLGFSV PASRYDCTRC QMLREITHTN GMFVKRLEIH GGFGLITHAI LGKFDFDSSF 180 PCEEFQLFDF QKESMQLVKN FLVQYFEACK QEGYDSLQDP LSTFYETLSV GLNDLDHQNN 240 DLRSSQGKTG DWNNQQENLK MKQAVGGSNQ GGFIKKSLKV QRERTRKMKL KDFKDYFHLP 300 MEVAAQKMNV CLTVMKKVCR KNGVLRWPHR KIKSIERKIA KKRKILDESG DNEEKARALE 360 DIQKHQQELA KIYEKFTK

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MANDSSSIFT FHDPFEEIPA NDPSLSFFNE DPTLGSFELP FNVEQNPVSY PDHEPGLELN  60
GLFDSEDPLS DSFIWAFCND SEDDIAGNFQ AGHSGFPGEG CSSHGINENC NGSQNPVSGD  120
NSTPSLGFSV PASRYDCTRC QMLREITHTN GMFVKRLEIH GGFGLITHAI LGKFDFDSSF  180
PCEEFQLFDF QKESMQLVKN FLVQYFEACK QEGYDSLQDP LSTFYETLSV GLNDLDHQNN  240
DLRSSQGKTG DWNNQQENLK MKQAVGGSNQ GGFIKKSLKV QRERTRKMKL KDFKDYFHLP  300
MEVAAQKMNV CLTVMKKVCR KNGVLRWPHR KIKSIERKIA KKRKILDESG DNEEKARALE  360
DIQKHQQELA KIYEKFTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	4e-14	Nin-like family protein