PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN24832.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 344aa MW: 38407.4 Da PI: 7.2376 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 20.2 | 1.3e-06 | 37 | 83 | 1 | 53 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 k+r rWt+e H++Fvea++ G + ++i e+++ k t +++SH Qk+ PIN24832.1 37 KQRERWTEEEHQKFVEALKLYGRA----WRQIEEHVGTK--TAIQIRSHAQKF 83 79****************998533....48999998877..888999999998 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1.1e-16 | 39 | 83 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++v+a k++G W+ I +++g ++t+ q++s+ qk+ PIN24832.1 39 RERWTEEEHQKFVEALKLYGRA-WRQIEEHVG-TKTAIQIRSHAQKF 83 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MVAEARDQIV ATGQKASVQP DGNGYTPKVR KPYTITKQRE RWTEEEHQKF VEALKLYGRA 60 WRQIEEHVGT KTAIQIRSHA QKFFAKVTRD SNVDAEGSLN PIEIPPPRPK KKPLHPYPRK 120 LVDSANAEIM VSPDDVSVPE RDNLSPSSVL SAIGSDSLKS TAMEMHKSCL SPVSCATDSR 180 SAYSLFTERD NDHATFDISV KEEIGFHLTM KTTFGPRPGD KCITKFELFP LEVECPKDSA 240 HAEEAYTSIK LFGKTVVVRD TGELSLEAEE NNCQSLTPHI SDELTSKGSL SNNDVFEPKG 300 AFNVGRKVYT RGFLPYKRCL AEKDGISLIS FLQEREGQRA RVCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17300.1 | 2e-50 | MYB_related family protein |