PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN24611.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 297aa MW: 33664 Da PI: 4.3485 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.4 | 5.6e-19 | 65 | 118 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ +++ +LA++lgL+ rqV vWFqNrRa++k PIN24611.1 65 KKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWK 118 566899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 127.4 | 6e-41 | 64 | 156 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLep+rKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++ dalk++ e+L++++e+L +e++e PIN24611.1 64 EKKRRLSVDQVKALEKNFEVENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANNDALKNKYESLQQDNESLLNEIQE 156 69**************************************************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MPSMKRLNSG DSLGALMSIC PNSTVDVEEH NQENNPMYPR EFQTMLEGLD EESGCVEESA 60 QVSEKKRRLS VDQVKALEKN FEVENKLEPD RKVKLAQELG LQPRQVAVWF QNRRARWKTK 120 QLERDYGVLK ANNDALKNKY ESLQQDNESL LNEIQELKSK LNQDGKNESR VSVKEEPLLS 180 DSDEKGKLET ATDLNFENFN QVMGGDLKDG SSDSDTSAIS NEDNNSPTGA ISQQSPHEFL 240 ASSSMNISFL TESKASYQPH EFVKIEEHNF FGEESCTSFF SDEQAPTLNW CCADDWN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 65 | 94 | KKRRLSVDQVKALEKNFEVENKLEPDRKVK |
2 | 113 | 121 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22430.1 | 9e-70 | HD-ZIP family protein |