PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24177.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 162aa MW: 17486.7 Da PI: 8.6767

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.00019	39	61	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H PIN24177.1 39 FECQHCHRKFANSQALGGHQNAH 61 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MEDNSDYPTN SSSEVKLFGF SVKSCEDVLP KHDLENKRFE CQHCHRKFAN SQALGGHQNA 60 HKKERQRLKR AHFVADHRRL GSAVHMINPH GSLIGQGVGA RPHCGYGARF VPLGEPHVLS 120 GVPLRFPAGF APPRAGVLGG GRGEVAGPST DGGEGLDVDL HL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58070.1	4e-12	C2H2 family protein