PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23679.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 367aa MW: 41876.6 Da PI: 8.9949

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	144.6	7.4e-45	108	243	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg...........k 89 +gkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LG+dk+sktieWL+ ++k+aikelt+++ + + +s+s+s++++s++ + PIN23679.1 108 TGKKDRHSKICTAQGIRDRRMRLSLQVARKFFDLQDMLGYDKASKTIEWLFCKSKKAIKELTKDNPQRN-----NSNSVSTDAKSESfisecevvsgiE 201 79************************************************************33333.....2333333333333455666654432 PP TCP 90 aaksaakskksqksaasalnlakesrakarararertrekmrikn 134 + + +++k ++ ++++ ++esr+kararar rtrek +ikn PIN23679.1 202 EIN---SNNKIKSTKKCKTINMRESREKARARARSRTREKLMIKN 243 222...333333333333556779***************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MFHSDNSDNP LESLFKRPSF QLSDQNPISK QDDPLFFSNF PSPFFDEHEY LPLNQMLLSD 60 NMLQPENHQE FVADQNENKP DSTKKETAKS GKSKEKGRNL GVVPRRRTGK KDRHSKICTA 120 QGIRDRRMRL SLQVARKFFD LQDMLGYDKA SKTIEWLFCK SKKAIKELTK DNPQRNNSNS 180 VSTDAKSESF ISECEVVSGI EEINSNNKIK STKKCKTINM RESREKARAR ARSRTREKLM 240 IKNLCKSSPN NQNDISKLGS SSSPFEGVDE ERVSTHATDF PHQLGDVGTI EKLLGSSCPN 300 ISDYNYNYNC SDPNSNFMGF LGNWDLFNND SRLNSSHFAV TNQVSFTGNY PNSVYSVTTP 360 NFQLFHQ

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MFHSDNSDNP LESLFKRPSF QLSDQNPISK QDDPLFFSNF PSPFFDEHEY LPLNQMLLSD  60
NMLQPENHQE FVADQNENKP DSTKKETAKS GKSKEKGRNL GVVPRRRTGK KDRHSKICTA  120
QGIRDRRMRL SLQVARKFFD LQDMLGYDKA SKTIEWLFCK SKKAIKELTK DNPQRNNSNS  180
VSTDAKSESF ISECEVVSGI EEINSNNKIK STKKCKTINM RESREKARAR ARSRTREKLM  240
IKNLCKSSPN NQNDISKLGS SSSPFEGVDE ERVSTHATDF PHQLGDVGTI EKLLGSSCPN  300
ISDYNYNYNC SDPNSNFMGF LGNWDLFNND SRLNSSHFAV TNQVSFTGNY PNSVYSVTTP  360
NFQLFHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	9e-31	TCP family protein