PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN23631.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 172aa MW: 19051.3 Da PI: 4.671 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 29.9 | 7.2e-10 | 10 | 55 | 2 | 47 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 ie+k +r++tf+kRr+g+ KK + d+e+a++ +s+ g+ + PIN23631.1 10 LIEDKPKRHTTFTKRRKGLEKKTRVFCNKFDVEAAILTVSEAGNAF 55 59***************************************99865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MVRRRIEIEL IEDKPKRHTT FTKRRKGLEK KTRVFCNKFD VEAAILTVSE AGNAFGYGHP 60 SVDMVLDRYL DRAPEENNGV EERLDGEVED EVEEAAAPLT EVEKRIVDGI ENGKWEVAIG 120 DLGLEELGEL EAEMRKIKSN VVARAREIAA SEKNVSDGGS SAGNSSSGSF RS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01530.1 | 2e-14 | M-type_MADS family protein |