PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23344.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 303aa    MW: 35281.4 Da    PI: 6.3515
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.11.7e-5381361128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPt+eelv +yLk+kv++ k++l +vi ++d+y++ePwd++      ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+vls k
  PIN23344.1   8 VPPGFRFHPTEEELVGYYLKRKVKSLKIDL-NVIIDIDLYRIEPWDIEDrckLGYEEQTEWYFFSHKDRKYPTGTRTNRATDAGFWKATGRDKAVLS-K 104
                 69****************************.99**************842432233667**************************************.8 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ +g++ktLvfykgrap+g+ktdW+mheyrl
  PIN23344.1 105 DRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 136
                 899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MEIMESCVPP GFRFHPTEEE LVGYYLKRKV KSLKIDLNVI IDIDLYRIEP WDIEDRCKLG  60
YEEQTEWYFF SHKDRKYPTG TRTNRATDAG FWKATGRDKA VLSKDRIIGM RKTLVFYKGR  120
APNGRKTDWI MHEYRLQTSE HAPPQEEGWV VCRAFKKPSP SHQKQGFEAW NNPKGHFRSE  180
SSHYRPPYFP SHNFDLLINQ GTNLNQSLNC SQSPFESQVL ELPNLDSPSI STSFTTNENN  240
IEDEKNNYGN QYSEWKCFDE LLQSQVIGAS SYARTNMALA PHNDDESDAR YHLSSVLECF  300
PDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-116NAC family protein