PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22721.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 334aa    MW: 37361.2 Da    PI: 9.3376
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix55.81.2e-1723102273
    trihelix   2 WtkqevlaLiearremeerlr........rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 
                 Wt qe+++Liea+r ++er          rgk ++ +W++v ++++++g+ rs++qC++kw+nl +++kk++e e++  +
  PIN22721.1  23 WTLQETMVLIEAKRMDDERRMkrlgdtseRGKPAELRWKWVEDYCWKKGCLRSQNQCNDKWDNLMRDFKKVREFERRLME 102
                 **************5555544222222225789****************************************9998754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDLTMANQGG NNTVLRDYRK GNWTLQETMV LIEAKRMDDE RRMKRLGDTS ERGKPAELRW  60
KWVEDYCWKK GCLRSQNQCN DKWDNLMRDF KKVREFERRL MERGGGEEKS YWRIEKNERK  120
DNNLPSNMLI HIYEALVDVV ERKGQRVAAG SGGAGSSSAN AVVEKSTINV LGHHSIPPPM  180
LQYPIIQPPT ILLPPPPPSQ TSPEPPILPS SQPLPASDSD TSEYSGSPAK RRKKRDGGTA  240
TAGVETSGDG ATLQEVGSAI SKSASIIAEA IQSCEEREER RHRELLRVHE RRLQIEESKA  300
EINRQGINGL VDAINKLANS ILALAAHKSQ SSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-51Trihelix family protein