PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22625.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 273aa    MW: 30904.8 Da    PI: 9.3369
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22625.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.8e-1889139256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f ++eeAa a+++ + +l+ge
  PIN22625.1  89 LYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFQSPEEAALAYDRQAFRLRGE 139
                 59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MDTTKFGAIE KQGPDSHVNH SIRPPKKIRY PEPGKNHNPS SSIPVPSKLV FPFVLDDQEP  60
LKSQSQQRHI PNMISFVDHR QISEATRKLY RGVRQRHWGK WVAEIRLPRK RTRLWLGTFQ  120
SPEEAALAYD RQAFRLRGEN ARLNFPHLFP SPPKKKAIDI TEPSLMSSNR MFSESIHVGV  180
SDSNFGDLPR GKNLEKDRLQ TSLDGFGDAM TTDLVMEGGH WGSQWGSNYI RDVSLSEPKT  240
DFLELSDLDI SGSIDDLLSA IDSQMIKANT TDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.13e-33ERF family protein