PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21941.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 504aa MW: 57212.7 Da PI: 8.2275

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21941.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00036	99	119	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F + L H+ +H PIN21941.1 99 CKQCGKAFQSLKALCGHMASH 119 ******************999 PP
2	zf-C2H2	13.3	0.00024	445	467	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+++F++ L H r+H PIN21941.1 445 HVCPFCDRVFKNGQALGGHKRSH 467 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MEEDQELRFV CKLCNKKYPC GKSLGGHMRS HVVANTAESE EKVESNMKKL SSLGQQCTLN 60 ESKVVEFGNG QFSYVLRENP RKTWRAVDSS FPLPQDKICK QCGKAFQSLK ALCGHMASHS 120 ERDKGFKDDN SSWTSESQKV VMDSHSDTEA EDQILRTRSS KSKRYKKVFV KSPSFTLANN 180 GSSSVSEIDG DEQEEVAMCL MMLSRDSYKG GVNSVVESSD NNSVILETKS SSIDMRFGKR 240 EVVKDVHNQE EIIPKMNKIE DLKLKDSVLD AQMENSDSGY FLDECAKAES DVSVDGFRRN 300 SAFNEYNKPL INEYGAEFRQ SLNRSKNKYD NGKIESRKRK YISEDPESCN EYGRTTRNDR 360 PNAEVCNISQ KRSKYECFNC KRIFKSYQAL GGHRPCHKRS SAYYESRYDS GDNSADDSTE 420 FVTTSKKKST AKNSSPEKKI KAKKHVCPFC DRVFKNGQAL GGHKRSHFMG GHEEINNQRP 480 AKKPDLLDLN LPAPEQDQDY GNEW

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MEEDQELRFV CKLCNKKYPC GKSLGGHMRS HVVANTAESE EKVESNMKKL SSLGQQCTLN  60
ESKVVEFGNG QFSYVLRENP RKTWRAVDSS FPLPQDKICK QCGKAFQSLK ALCGHMASHS  120
ERDKGFKDDN SSWTSESQKV VMDSHSDTEA EDQILRTRSS KSKRYKKVFV KSPSFTLANN  180
GSSSVSEIDG DEQEEVAMCL MMLSRDSYKG GVNSVVESSD NNSVILETKS SSIDMRFGKR  240
EVVKDVHNQE EIIPKMNKIE DLKLKDSVLD AQMENSDSGY FLDECAKAES DVSVDGFRRN  300
SAFNEYNKPL INEYGAEFRQ SLNRSKNKYD NGKIESRKRK YISEDPESCN EYGRTTRNDR  360
PNAEVCNISQ KRSKYECFNC KRIFKSYQAL GGHRPCHKRS SAYYESRYDS GDNSADDSTE  420
FVTTSKKKST AKNSSPEKKI KAKKHVCPFC DRVFKNGQAL GGHKRSHFMG GHEEINNQRP  480
AKKPDLLDLN LPAPEQDQDY GNEW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	3e-69	C2H2 family protein