PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21922.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 389aa MW: 43172 Da PI: 8.3262

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.1	7.7e-41	144	221	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegCe+ l +ak+yhrrhkvCe+h+kap+v+v g+eqrfCqqCsrfh + efDe+krsCrrrLa+hnerrrk+++ PIN21922.1 144 RCQVEGCEVVLVNAKDYHRRHKVCEMHAKAPKVVVLGIEQRFCQQCSRFHGVGEFDESKRSCRRRLAGHNERRRKSSQ 221 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEYYWTTLFD NSTSSDAVRG HNGNYSTHHA WESWDLASSS SDISRVDCSY TLHKSLNYTT 60 PPSAAAASSA ARQVEELNYY KPDPHLMCLK LGKRHYFEDF TNPPAAAAEG RSSTAKKGKL 120 YCATQGGRPS AATVADAAPV VVPRCQVEGC EVVLVNAKDY HRRHKVCEMH AKAPKVVVLG 180 IEQRFCQQCS RFHGVGEFDE SKRSCRRRLA GHNERRRKSS QDQHSFSRKP HQDIKMAAAV 240 AAGGRHPHFL NSSECALSLL SSTNYNSPWN FSMSPDLPAR CSAALRDLIA ENRASILACR 300 QLVYPCNNNH QIISDFYNNN NNNSSNTYKL GSIRPGSYPH ENGSHVTLDL MQAPNSTFGL 360 LSVNGHSHKS SKEGDEDDCS ELWKVPLGY

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEYYWTTLFD NSTSSDAVRG HNGNYSTHHA WESWDLASSS SDISRVDCSY TLHKSLNYTT  60
PPSAAAASSA ARQVEELNYY KPDPHLMCLK LGKRHYFEDF TNPPAAAAEG RSSTAKKGKL  120
YCATQGGRPS AATVADAAPV VVPRCQVEGC EVVLVNAKDY HRRHKVCEMH AKAPKVVVLG  180
IEQRFCQQCS RFHGVGEFDE SKRSCRRRLA GHNERRRKSS QDQHSFSRKP HQDIKMAAAV  240
AAGGRHPHFL NSSECALSLL SSTNYNSPWN FSMSPDLPAR CSAALRDLIA ENRASILACR  300
QLVYPCNNNH QIISDFYNNN NNNSSNTYKL GSIRPGSYPH ENGSHVTLDL MQAPNSTFGL  360
LSVNGHSHKS SKEGDEDDCS ELWKVPLGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-37	SBP family protein