PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21921.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 327aa MW: 35974.4 Da PI: 8.302

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.2	3.7e-41	172	249	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ PIN21921.1 172 RCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKSQQ 249 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MLDYGWGNPS SIMLSGEENA QDSENRQVFD PYATQNFSET ANFVSPETHF AAAAAAPHHH 60 LPFNHPQNPN TNTHFASFYD ARAYSAPGSS YPHPQTPPAS MLTLEPAAPT GFMVVPKSEP 120 VVGGLEFNTE YNSRIGLNLG GRTYFASSED DFVNRLYRRS RILEPGSVNS PRCQAEGCNA 180 DLTHAKHYHR RHKVCEFHSK ASTVIAAGLT QRFCQQCSRF HLLSEFDNGK RSCRKRLADH 240 NRRRRKSQQS NNQETSNKSQ LENTAPNSSS ENLTRSPPDS GPHSSSVTVA ISPPRISLDC 300 FGHRSYTGGG ANTSSTASTS SLFYSNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	3e-79	SBP family protein