PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21752.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 397aa    MW: 43413.5 Da    PI: 4.3799
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS276.11.1e-84154395135374
        GRAS 135 RpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvks 233
                 R+++p+   +Tg+g+p++++++ l+e+g++LakfAe+++v+fe++ +va++l+dl+  ++++++gE++aVn++++lh+ll++++++e+    vL++v++
  PIN21752.1 154 RTQPPAPPPLTGIGPPSNDNTDHLQEVGWKLAKFAETINVEFEYRGFVATSLADLNAAMFDIREGETVAVNSIFELHQLLARPGAIEK----VLQVVRE 248
                 5555556669******************************************************************************....******* PP

        GRAS 234 lsPkvvvvveqeadhnsesFlerflealeyysalfdsleak.lpres....eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpv 327
                 l+P++++vveqea+hn++ Flerf+e+l+yys+lfdsle+  +++ +    ++++++++++lgr+i+nvvaceg +r+erhetl +Wr r+++aGF+pv
  PIN21752.1 249 LKPEILTVVEQEANHNGNVFLERFTESLHYYSTLFDSLESCgAGNCDalvsDQDKVMSEVYLGRQICNVVACEGVDRIERHETLTQWRVRFGSAGFGPV 347
                 **************************************766233332566699********************************************** PP

        GRAS 328 plsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +l+++a+kqa++ll+ ++ +dgyrvee++g+l+lgW++r+L+++SaW+
  PIN21752.1 348 HLGSNAYKQASMLLALFAgGDGYRVEENNGCLMLGWHTRTLIATSAWK 395
                 ***********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MKREHTNQEN FSSSGSCSSS GKAKMWSCEA EDAGVDELFA VLGYKVKSSD MAEVAQKIEQ  60
LEEVMGSVQQ DGLSQLASET VHYNPSDLSS WLESMISGLN PMPEFDSSSD PFLESSTITT  120
IDNGSSVNSR AQMVADSDFG SDLISIPGKA IYPRTQPPAP PPLTGIGPPS NDNTDHLQEV  180
GWKLAKFAET INVEFEYRGF VATSLADLNA AMFDIREGET VAVNSIFELH QLLARPGAIE  240
KVLQVVRELK PEILTVVEQE ANHNGNVFLE RFTESLHYYS TLFDSLESCG AGNCDALVSD  300
QDKVMSEVYL GRQICNVVAC EGVDRIERHE TLTQWRVRFG SAGFGPVHLG SNAYKQASML  360
LALFAGGDGY RVEENNGCLM LGWHTRTLIA TSAWKLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-118GRAS family protein