PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN21685.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SRS

Protein Properties

Length: 307aa MW: 33731.2 Da PI: 8.5515

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN21685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	108.4	1.2e-33	108	163	3	58
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaa 58 + +++CqdCGnqakkdC ++RCRtCCksrgf+C+thvkstWvpaakrrerqqq PIN21685.1 108 NDGINCQDCGNQAKKDCPYMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQVVI 163 5679**********************************************999754 PP
2	DUF702	84.5	2.6e-26	186	240	100	154
DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 le s+lP+ev+s+avfrcvrvs++++++e+laYqtav+igGhvfkGiLydqG+e+ PIN21685.1 186 LELSNLPPEVNSQAVFRCVRVSAMEEADEHLAYQTAVNIGGHVFKGILYDQGPES 240 57789************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MSGFFSLGKS QDQHPQTDNR HSLFLFKNEE IYNKSFELWQ QQYHLHQQRL HPSHSHNTVQ 60 HVDFSIGPSR RDNNNVNGGN NIGNELSNYS NYYRSTGFRV MSQGRGRNDG INCQDCGNQA 120 KKDCPYMRCR TCCKSRGFQC QTHVKSTWVP AAKRRERQQQ VVIRGEATKR FREINPGAGG 180 SGGGGLELSN LPPEVNSQAV FRCVRVSAME EADEHLAYQT AVNIGGHVFK GILYDQGPES 240 AYPSGGGESS SGGGGSQQQP LDLIAAAAAT SGATTSNLNA TMADPSIYPT QYGGYMAGTQ 300 FFLPPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	2e-60	SRS family protein