PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN20681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 306aa MW: 34162.5 Da PI: 8.4914 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.2 | 6.5e-19 | 139 | 193 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k PIN20681.1 139 RKKLRLSKEQAAVLEETFKEHNTLNPKQKMALAKQLNLRPRQVEVWFQNRRARTK 193 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 128.1 | 3.6e-41 | 139 | 228 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+++LEe+F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+L+r++++l+een+rL+kev+eLr +l PIN20681.1 139 RKKLRLSKEQAAVLEETFKEHNTLNPKQKMALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVTELR-AL 228 69*************************************************************************************9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MAEKDDGLGL SLSLRCSENQ ILDNPPPAPS PAPRSGAARF PFNLFKSPLP LVQEHKSSSA 60 YAFQPSPADR NADSRQLFRG IDVNRAVTVI DCDEEVMVSS PNSTVSSLSG KRSEREENDG 120 ERASSSLEME DDGGDAAARK KLRLSKEQAA VLEETFKEHN TLNPKQKMAL AKQLNLRPRQ 180 VEVWFQNRRA RTKLKQTEVD CEYLRRCCEN LTEENRRLQK EVTELRALKL SPQFYMNMSP 240 PTTLTMCPQC ERVAVSSSSS ATTSSTIPTN GAGLSRQPAH HQRPMPMNSW AAIFPPQPLD 300 SHRPRT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 188 | 196 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60390.1 | 8e-84 | HD-ZIP family protein |