PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN20307.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TALE

Protein Properties

Length: 381aa MW: 42884.4 Da PI: 6.3256

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN20307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.7	8.3e-08	319	352	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + PIN20307.1 319 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 352 569*****************************87 PP
2	ELK	29	2.4e-10	273	294	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ PIN20307.1 273 ELKHELKQGYKEKIVDIREEIL 294 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MAFQDHHQLS QEIPLHLPRY SDHHQPSSAS AAAVFRSILP DHHHSPDDKP PPTTTTWLNS 60 STLHHQWLTS QSQPSPPDNS DHHQDSGGGG GDNSNNGNGN NTNWEKEKCK ADILNHPLYE 120 QLLSAHVACL RIATPVDQLP RIDAQLAQSQ QVVAKYSVLG HGQPPLDDKD LDHFMTHYVL 180 LLSSFKEQLQ QHVRVHAMEA VMACWELEQS LQSLTGVAPG EGTGATMSDD DEDQGDSEIN 240 LFDESLDGAD NMGFGPLVPT ESERSLMERV RQELKHELKQ GYKEKIVDIR EEILRKRRAG 300 KLPGDTTSVL KAWWQSHAKW PYPTEEDKAR LVQETGLQLK QINNWFINQR KRNWHSNPSS 360 SSSQKSKRKS AGDKTTNEHF A

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MAFQDHHQLS QEIPLHLPRY SDHHQPSSAS AAAVFRSILP DHHHSPDDKP PPTTTTWLNS  60
STLHHQWLTS QSQPSPPDNS DHHQDSGGGG GDNSNNGNGN NTNWEKEKCK ADILNHPLYE  120
QLLSAHVACL RIATPVDQLP RIDAQLAQSQ QVVAKYSVLG HGQPPLDDKD LDHFMTHYVL  180
LLSSFKEQLQ QHVRVHAMEA VMACWELEQS LQSLTGVAPG EGTGATMSDD DEDQGDSEIN  240
LFDESLDGAD NMGFGPLVPT ESERSLMERV RQELKHELKQ GYKEKIVDIR EEILRKRRAG  300
KLPGDTTSVL KAWWQSHAKW PYPTEEDKAR LVQETGLQLK QINNWFINQR KRNWHSNPSS  360
SSSQKSKRKS AGDKTTNEHF A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11060.1	1e-158	TALE family protein