PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN19905.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 593aa    MW: 64815 Da    PI: 4.8118
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN19905.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.17.3e-1382175911374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAeav++++++la+ l++++  la +++ +m+++a+yf+eALa+r++r    ly    p + +  +s+ + + +  f+e++P+lkf+h+taN
  PIN19905.1 217 LVHTLMACAEAVQQENFKLAEVLVKNIGFLAVSQAGAMRKVATYFAEALARRIYR----LY----PANPQ--DSAFSDMLQMHFYETCPYLKFAHFTAN 305
                 689****************************************************....44....33333..34444455556**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea++g++rvH+iDf+++qG+QWpaLlqaLa Rp+gpps+R+Tg+g+p++++++ l+e+g++La++Ae+++v+fe++ +va++l+dl+ +++++++
  PIN19905.1 306 QAILEAFAGKSRVHVIDFSMKQGMQWPALLQALALRPGGPPSFRLTGIGPPSHDDTDHLQEVGWKLAQLAETINVEFEYRGFVANSLADLDASMFDIRE 404
                 *************************************************************************************************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak..............lpres...e 280
                 gE++a+n++++lh+l ++++++e+    vL++v++l+P++++vveqea+hn++ Fl+rf+eal+yys+lfdsle+                   +   +
  PIN19905.1 405 GETVAINSIFELHQLIARPGAIEK----VLRVVRELKPEILTVVEQEANHNGNVFLDRFTEALHYYSTLFDSLESCgsgaaaaaaaansgD---AvvsD 496
                 ************************....*********************************************988899999987655442...14559 PP

        GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++++++ +lgr+i+nvvaceg +r+erhetl++Wr r+++a F+pv+l+++a+kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaW+
  PIN19905.1 497 QDKVMSEIYLGRQICNVVACEGLDRVERHETLAQWRTRFGSAEFEPVHLGSNAYKQASMLLALFAgGDGYRVEENNGCLMLGWHTRPLIATSAWK 591
                 99********************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    
MKRDNRNEGN FSSSGSCSSS GKAKMWPCEA EDAGVDELFA VLGYNVKSSD MVEVAQKIEQ  60
LEEVMGNVQQ DGLSQLASET VHYNPSDLFS WLDSMITGLN PMPEFDSSSD PFLESSTITS  120
IDNSSSVNSH AQMAVDLDFG SDLIAIPGKA VYPRTQTSPQ PPAPPPEQHQ PQAKKPKTSP  180
CLGNSAGGLH SEPGFARPVE SARPVVLVDS QENGIRLVHT LMACAEAVQQ ENFKLAEVLV  240
KNIGFLAVSQ AGAMRKVATY FAEALARRIY RLYPANPQDS AFSDMLQMHF YETCPYLKFA  300
HFTANQAILE AFAGKSRVHV IDFSMKQGMQ WPALLQALAL RPGGPPSFRL TGIGPPSHDD  360
TDHLQEVGWK LAQLAETINV EFEYRGFVAN SLADLDASMF DIREGETVAI NSIFELHQLI  420
ARPGAIEKVL RVVRELKPEI LTVVEQEANH NGNVFLDRFT EALHYYSTLF DSLESCGSGA  480
AAAAAAANSG DAVVSDQDKV MSEIYLGRQI CNVVACEGLD RVERHETLAQ WRTRFGSAEF  540
EPVHLGSNAY KQASMLLALF AGGDGYRVEE NNGCLMLGWH TRPLIATSAW KLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein