PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN19754.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | C2H2 | ||||||||
Protein Properties | Length: 234aa MW: 24452.9 Da PI: 8.5976 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 81 | 103 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++Cgk Fs+ L H +H PIN19754.1 81 YKCSICGKGFSSYQALGGHKTSH 103 9***********99998888777 PP | |||||||
2 | zf-C2H2 | 12.9 | 0.00034 | 141 | 163 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F++ L H r+H PIN19754.1 141 HECSICHKNFPTGQALGGHKRKH 163 78*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MAIEAINSLG AAVQTTSNRR ADGAGLANDN DSWRKPKRSK LVSDEEYLAG CLVMLSRSDG 60 DSRDTSSAAA SESTPKIIAS YKCSICGKGF SSYQALGGHK TSHRNRPHGG GGAAASENNK 120 PSTSTSTATT DGSDYVNGRR HECSICHKNF PTGQALGGHK RKHYEGIIGR NAKIGLNSLA 180 GISGSSSVTS TISGGGTSQS HGGDGDDDVT PFRRNLDLNL PPPVELDLRL NFLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19580.2 | 6e-29 | C2H2 family protein |