PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN19542.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 485aa MW: 53801.2 Da PI: 7.8435

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN19542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.1	9e-34	171	228	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k PIN19542.1 171 DDGYNWRKYGQKQVKGSENPRSYYKCTHPNCPTKKKVERSL-DGQITEIVYKGTHNHPK 228 8**************************************.*************85 PP
2	WRKY	107.4	7.2e-34	346	404	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k+ver+++dp+ v++tYeg+Hnh+ PIN19542.1 346 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSSGCPVRKHVERASHDPRSVITTYEGKHNHD 404 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MSSRSFTALL SSDHLSSNTN TSAAAVSRGL GDRIAERTGA GVPKFKSLPP PSLPISPPAA 60 ASPSSWFAIP PGLSPAELLD SPILLSASNI LPSPTTGSYP IQGFDWKSNS IRAQQQQQND 120 IKNEQNNFSD FTFQTQTKPY DMSFSPDIST IQANEEYNQS SQITRDKGRS DDGYNWRKYG 180 QKQVKGSENP RSYYKCTHPN CPTKKKVERS LDGQITEIVY KGTHNHPKPQ STRRSSSSLT 240 TAPVMNQSYN RQYDEIREQS CGSNGVGKVD SSVVTPDNST ISVGDDDFEQ TSERRSRSGG 300 DEIDEEEPDV KRWKGETETE GISAIGNRAV REPRVVVQTR SDIDILDDGY RWRKYGQKVV 360 KGNPNPRSYY KCTSSGCPVR KHVERASHDP RSVITTYEGK HNHDVPAPRG SGNSNNLIRR 420 PLALPNNSSN YSMPMFDSLR PTMFEAQQPY SSSGFGTLDN ESFSRAKEEP RDDMFLESLL 480 CSIAP

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MSSRSFTALL SSDHLSSNTN TSAAAVSRGL GDRIAERTGA GVPKFKSLPP PSLPISPPAA  60
ASPSSWFAIP PGLSPAELLD SPILLSASNI LPSPTTGSYP IQGFDWKSNS IRAQQQQQND  120
IKNEQNNFSD FTFQTQTKPY DMSFSPDIST IQANEEYNQS SQITRDKGRS DDGYNWRKYG  180
QKQVKGSENP RSYYKCTHPN CPTKKKVERS LDGQITEIVY KGTHNHPKPQ STRRSSSSLT  240
TAPVMNQSYN RQYDEIREQS CGSNGVGKVD SSVVTPDNST ISVGDDDFEQ TSERRSRSGG  300
DEIDEEEPDV KRWKGETETE GISAIGNRAV REPRVVVQTR SDIDILDDGY RWRKYGQKVV  360
KGNPNPRSYY KCTSSGCPVR KHVERASHDP RSVITTYEGK HNHDVPAPRG SGNSNNLIRR  420
PLALPNNSSN YSMPMFDSLR PTMFEAQQPY SSSGFGTLDN ESFSRAKEEP RDDMFLESLL  480
CSIAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-109	WRKY family protein