PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN19102.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 227aa MW: 25735.6 Da PI: 8.6344 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.4 | 7.7e-19 | 37 | 82 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd++l ++v+ +G+++W++I++++ gR++k+c++rw + PIN19102.1 37 RGPWSAEEDKILTRLVETYGPRNWSLISKYIK-GRSGKSCRLRWCNQ 82 89*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 56.5 | 6.3e-18 | 91 | 133 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEd+ + a++++G++ W+tIar ++ gRt++ +k++w++ PIN19102.1 91 PFSAEEDDAIMAAHEKYGNR-WATIARLLP-GRTDNAVKNHWNST 133 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MDLFHRCSSA SNSSSSECSS DSSSLRPRNG DKSERIRGPW SAEEDKILTR LVETYGPRNW 60 SLISKYIKGR SGKSCRLRWC NQLSPTVEHR PFSAEEDDAI MAAHEKYGNR WATIARLLPG 120 RTDNAVKNHW NSTLKRRYQI KQQQKQRVDE EAKNVASASS VSNFEENDPM TELSLALPGM 180 SGAAGVTERR EENFPTGFWD VMRNVIAREV REFVTTSFPE SSSGFHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 1e-54 | MYB family protein |