PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN18954.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 354aa    MW: 38512.9 Da    PI: 6.788
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN18954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-12288333655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR +i +++ +L+el+P+      k  + a++L +Av+YIk+Lq
  PIN18954.1 288 SIAERVRRTKISERMRKLQELVPNM----EKQTNTADMLDLAVDYIKDLQ 333
                 689*********************7....467*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MQMDSGLTRY RSAPSSYFAT FLNNTDGGFG ADEFGQLFNP RASSPETQRI FARFMNTPEN  60
NQQNSQFLAP IKNELETEQP RQELPGDQSS DYCSSVMFQS SGAVNSAVGS SYEGIIAANR  120
GTEMKMDGGG GGGGGGGGGG SGLVRHRSSP AGLFDNINIA SDFGAMRSIS NFGAGITPPI  180
SQVENKSIGE NNPGDKELGE DHDYLINPWD DPAILSDEFL KGLSETDSKL FPKAEAPDNQ  240
NNEGGNRPPA PLSHHLSLPK SPAMEKLLRD TVPCKIRAKR GCATHPRSIA ERVRRTKISE  300
RMRKLQELVP NMEKQTNTAD MLDLAVDYIK DLQRRVKVLS ENHAKCSCSA KRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.11e-59bHLH family protein