PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN18496.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 186aa MW: 22099.1 Da PI: 5.3773 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69.8 | 7.3e-22 | 23 | 152 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdk.kyatgkrknr.atksgyWkatgkdkevlsk 95 lp G rF Ptd+el+ yL++kv + l+++ + i+ +++y+v+P+ L +++ ++e e yfF++ ++ y + ++ +r gyW+ gk+ +v+++ PIN18496.1 23 LPLGWRFVPTDQELIISYLTNKVFFRALPAKAIkeIDAMELYSVHPKVLVESI-SNEPEHYFFVRDHEyFYGEINKMKRvGDGIGYWRCIGKEDPVHDA 120 699********************99997774323377778*********8665.4466888887755415667778888445589*************9 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+l k +++ pk +t+W ++ yrl PIN18496.1 121 EGNLRAFKIHSTYF-SIIPKRMRTHWRLEVYRL 152 99999999999999.5667779*********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MASVERIQTE LQLDSEEENQ IELPLGWRFV PTDQELIISY LTNKVFFRAL PAKAIKEIDA 60 MELYSVHPKV LVESISNEPE HYFFVRDHEY FYGEINKMKR VGDGIGYWRC IGKEDPVHDA 120 EGNLRAFKIH STYFSIIPKR MRTHWRLEVY RLVDIEPSTE DEEELHVGEW VVARITRGKD 180 PRKQWF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08790.1 | 2e-20 | NAC family protein |