PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN18485.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 115aa    MW: 12880 Da    PI: 5.6851
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN18485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.0003189109121
                 EEETTTTEEESSHHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHir 21 
                 y C+ C++sF ++  L+ H +
  PIN18485.1  89 YACTTCNRSFQSHRALEGHKS 109
                 89***************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MKFVQNHSEK QNDKVEDVDS SSLVADDHQF KKRKTESAID VAEEKLVEAE AKAEAESKAV  60
TESEAEVESK AEAEKINQES SGTSTRQNYA CTTCNRSFQS HRALEGHKSS RNKFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56200.11e-06C2H2 family protein