PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN17894.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 311aa MW: 34727.9 Da PI: 8.2115 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.2 | 1.1e-19 | 153 | 203 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ +r++lg+f+ta eAaka+++a+ kl+g PIN17894.1 153 HYRGVRQRP-WGKFAAEIRDPTRK--GTRVWLGTFDTAVEAAKAYDRAAFKLRG 203 7********.**********8542..4*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MASPAESSAL EIIRQHLLDD HAFMENYCPS DAKLSSSDQF HQISRTSSNS SCSSSSSCSI 60 EKPAASVFMP TFSFFTPKAE HDYQYLEFET KPQISSNSNH VKQKSFTERK PSLNIAIPNA 120 TNKVLQWGQN PTSNFEVKVA ESKFEQNYGD RRHYRGVRQR PWGKFAAEIR DPTRKGTRVW 180 LGTFDTAVEA AKAYDRAAFK LRGSKAILNF PLEIGNSNPL PQNEAAPAAA SGCRKREREG 240 ECEEIEKKEV KREEEPREVK AESQVTAAVP LTPSSWKAVW DLGDGKGIFE VPPLSPLSPH 300 PSLGYSRLMV I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17490.1 | 1e-45 | ERF family protein |