PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17832.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 387aa    MW: 43266.7 Da    PI: 9.2219
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17832.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-18254301354
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                 ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+
  PIN17832.1 254 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAFAYDTAAYILR 301
                 8******9.**********955...5**********************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MEPFMQKEYL ASSLEGMNPN IFCGLNSSSS TKRSIPSRRS TFPVDEVISN TIINTHPSSS  60
RSISSRGSTS PINEVVSNYT ILNTQSSPIN EVISNHTVLH TQLSELSKES IIRKFHAHYL  120
LPMNGSCGSH HGENYIPMNF LESFPSSKEV KPSPPCSSKV PNLSLFLQDP SPQSQINKGK  180
TRNPKSFSEN PLFSISQFDQ NQSESKWLKV HSQQLTAYPS KGYSDYWLST TKTQPMKFSS  240
KQKSPLPSSQ GKLFRGVRQR HWGKWVAEIR LPRNRTRVWL GTFDTAEEAA FAYDTAAYIL  300
RAKLQAVSSA QKKAIDQRSS SSEAVLEEES RISCLKQKAE AEAEVIEIKK SSEGIISEVD  360
AVQLSRLPSL DMDMIWDALL VSDSSSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.11e-30ERF family protein