PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN17574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | Trihelix | ||||||||
Protein Properties | Length: 200aa MW: 23362.6 Da PI: 7.1948 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 76.1 | 5.4e-24 | 23 | 105 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ qe+++ + +r e++ ++ ++k++k lWe +s++m+e+g++rsp qCk+kw+nl +ryk ++++e + ++++p++++++ PIN17574.1 23 QWSMQETRQFLIIRAELDPTFMETKRNKLLWELISNQMKEKGYNRSPDQCKCKWKNLVTRYKGCETREAEW---MRQQFPFYNEMQ 105 7********************************************************************85...55689******8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MDPYPFGEAG VSIDLGGGDR FPQWSMQETR QFLIIRAELD PTFMETKRNK LLWELISNQM 60 KEKGYNRSPD QCKCKWKNLV TRYKGCETRE AEWMRQQFPF YNEMQAIFNA RMQRMLWMEA 120 ESGAATAGSS SRKKAAVQYS SEEEDEINDD SGGGKKKRKM KMKMKMNEAT NPHSGNLNIV 180 DGVREMMDEF MKQQMETEMQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38250.1 | 2e-52 | Trihelix family protein |