PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17532.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 626aa MW: 69863.1 Da PI: 7.9294

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	87.1	1.6e-27	355	411	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK vkg++f rsYY+Ct+++C++kk+vers+ d+ +++ Y g+H+h+k PIN17532.1 355 DGYNWRKYGQKLVKGNKFIRSYYKCTYPNCQAKKQVERSH-DGCKTDVNYLGKHHHPK 411 9*************************************.*************85 PP
2	WRKY	104.6	5.5e-33	526	583	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vkg+++prsYYrC+ agCpvkk+ver+++d kvv++tYeg+H+h+ PIN17532.1 526 NDGYRWRKYGQKLVKGNPNPRSYYRCSNAGCPVKKHVERASHDSKVVITTYEGQHDHD 583 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MHQSKSQHDV NQEGNSCKMP EKEPSSLWQK QNPESGNHGS QLDEVRPATK QEPHDLRQTH 60 SLGTGNDVSE CREEERTASC KNEEDSDMLI EKQSSNPGVP AQESNPSMVS HMRDEKALEK 120 LQPRRNLDAG VHQSHSDQES IPSRVPLDFS KTPKDESDNP HLRQGVEPSE TRAGERTFSV 180 KREMVSDALL PVQSFKGAPA SQSDKQKLTG STRAEKVVEK LRPRRNTEAG GCSSQTEKAR 240 ISPSVLEKVS TIPKEEPQST NIQPRQCLDA RNHALVSKEE KFTSTKREQV SENFTQMSSV 300 GVPVPQSDQE NFTYSTKCEK VEKLQPRRNP DPVVHRSQSD AEKSTPSKVL EKALDGYNWR 360 KYGQKLVKGN KFIRSYYKCT YPNCQAKKQV ERSHDGCKTD VNYLGKHHHP KPQNSPQATP 420 PFQVQTPEIP IATSSKTDAE PIIDHDGANQ HIVPTETSCQ PIVGRGVDGV TGAVSSSNNE 480 KNDKDDHPDS KRQKREITTA ADNVANKTNS DLRHVVETLS EVDIINDGYR WRKYGQKLVK 540 GNPNPRSYYR CSNAGCPVKK HVERASHDSK VVITTYEGQH DHDMPASRTV SQSIAVGDAN 600 KITTNGESRS KTEENKVEMV VHVSAN

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MHQSKSQHDV NQEGNSCKMP EKEPSSLWQK QNPESGNHGS QLDEVRPATK QEPHDLRQTH  60
SLGTGNDVSE CREEERTASC KNEEDSDMLI EKQSSNPGVP AQESNPSMVS HMRDEKALEK  120
LQPRRNLDAG VHQSHSDQES IPSRVPLDFS KTPKDESDNP HLRQGVEPSE TRAGERTFSV  180
KREMVSDALL PVQSFKGAPA SQSDKQKLTG STRAEKVVEK LRPRRNTEAG GCSSQTEKAR  240
ISPSVLEKVS TIPKEEPQST NIQPRQCLDA RNHALVSKEE KFTSTKREQV SENFTQMSSV  300
GVPVPQSDQE NFTYSTKCEK VEKLQPRRNP DPVVHRSQSD AEKSTPSKVL EKALDGYNWR  360
KYGQKLVKGN KFIRSYYKCT YPNCQAKKQV ERSHDGCKTD VNYLGKHHHP KPQNSPQATP  420
PFQVQTPEIP IATSSKTDAE PIIDHDGANQ HIVPTETSCQ PIVGRGVDGV TGAVSSSNNE  480
KNDKDDHPDS KRQKREITTA ADNVANKTNS DLRHVVETLS EVDIINDGYR WRKYGQKLVK  540
GNPNPRSYYR CSNAGCPVKK HVERASHDSK VVITTYEGQH DHDMPASRTV SQSIAVGDAN  600
KITTNGESRS KTEENKVEMV VHVSAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-73	WRKY family protein