PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17442.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 285aa    MW: 32964 Da    PI: 8.6568
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.93.6e-48211562128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknra..tksgyWkatgkdkevlsk. 95 
                  pGfrFhPtdeelv +yL kkv+gk++++ + ik++diyk++PwdLpk  + +++e+ewyfF+ r +ky+++ r+nr+  t sg+Wkatg dk+++++ 
  PIN17442.1  21 LPGFRFHPTDEELVGFYLMKKVQGKSIRT-DLIKQIDIYKYDPWDLPKisSSNTGETEWYFFCMRGRKYRNSLRPNRVtlTGSGFWKATGIDKPIHDSs 118
                 69**************************9.99***************5445566888********************633679**************75 PP

         NAM  96 .kgel......vglkktLvfykgrapkgektdWvmheyrl 128
                  +  +      +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  PIN17442.1 119 iS--AfnyrciIGLKKSLVYYRGNAGKGTKTDWMMHEFRL 156
                 50..2555556***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MVVENNNCDA KNDKNEEVVV LPGFRFHPTD EELVGFYLMK KVQGKSIRTD LIKQIDIYKY  60
DPWDLPKISS SNTGETEWYF FCMRGRKYRN SLRPNRVTLT GSGFWKATGI DKPIHDSSIS  120
AFNYRCIIGL KKSLVYYRGN AGKGTKTDWM MHEFRLPPTH VGSNSNISYQ EAEIWTLCRI  180
FKRDSSYKKY TPHWKQNMRK ETSSESRTCS LESAESSGNQ VTSNGNEVIK NSFQEIRSHF  240
HNISEEIIYD RSPIISSSSS LWTENGDELF RNGNWDELGS VIRSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.17e-86NAC family protein