PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN17338.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 180aa    MW: 19926.4 Da    PI: 8.3333
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN17338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-183384156
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+ +l+g+
  PIN17338.1 33 PVYRGVRKRR-WGKWVSEIREPKK---KSRIWLGSFPAPEMAARAYDVAAYCLKGH 84
                68*****887.**********854...6*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MEQPPPCNND HHNTISPDSA TAAENRRGGT RHPVYRGVRK RRWGKWVSEI REPKKKSRIW  60
LGSFPAPEMA ARAYDVAAYC LKGHKAQLNF PEEIEHLPRP STNTARDIQA AAALAAKMVA  120
HRSVAAIQGG EGDDFWAEIE LPELMGCNDY VSKVRYNWGS CNSGALPGDA TSMDTGERII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.13e-51ERF family protein