PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN17198.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 285aa MW: 32799.7 Da PI: 10.1852

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN17198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.4	4.1e-21	25	115	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffkv+ +l s++l +p +f++++g + +++l+d g++W+v + +++++++l++GW++Fv+ Lk+gDf+vF++d++ +f vk+f + PIN17198.1 25 FFKVF--LPHLCSHQLLIPPDFIKDFGRT--INEKVILKDIGGKQWQVDV--HRTPNGVFLKNGWQSFVDYYCLKVGDFLVFRYDRSYTF--IVKIFGR 115 88888..8899999*******999855..6679***********..******************************986777..9999986 PP
2	B3	48.3	1.8e-15	198	279	13	96
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 + l +p++ +e+h+++ e ++tl++ g++W v++ y++k+gr ++++GW +F k+n++ ++D+++F++ + +++ +vk+ PIN17198.1 198 QYKLQIPNEVIESHNLNLE--GEMTLRTVGGKEWPVNV-YSGKDGRKYIGSGWWSFQKDNKMGAKDSCIFTFPTErLSRTINVKI 279 45689*******99944..48***********.999999************************76444666677766 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MMKRGRGRPR KLSHSSSPPC ESAEFFKVFL PHLCSHQLLI PPDFIKDFGR TINEKVILKD 60 IGGKQWQVDV HRTPNGVFLK NGWQSFVDYY CLKVGDFLVF RYDRSYTFIV KIFGRNGCKK 120 GPFAAKNIAT HVKAEEKADE DIEGKQTSSK RARLHEDDHL LSGNQRATRS REKMKDLKNA 180 DRVPVPPYFI SNPCQSNQYK LQIPNEVIES HNLNLEGEMT LRTVGGKEWP VNVYSGKDGR 240 KYIGSGWWSF QKDNKMGAKD SCIFTFPTER LSRTINVKIL LVKVW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3	11	KRGRGRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	1e-32	B3 family protein