PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 159aa MW: 17423.8 Da PI: 5.0044 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 57.6 | 1.6e-18 | 9 | 55 | 1 | 47 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 k ie++ +r++tf+kRr+g+ KK +EL+ LCdae a+i+fs g++y PIN16777.1 9 KLIEDDAKRHTTFTKRRKGLEKKTKELCHLCDAEGAIIVFSRAGNVY 55 569*****************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MVRRKIEIKL IEDDAKRHTT FTKRRKGLEK KTKELCHLCD AEGAIIVFSR AGNVYACGNP 60 AVNVIVDRYL ALAEDNGGED RVHGDADEEE AAPPLTEMEK MIVEAIEGGR LAWEATVRNL 120 GLSELAELES LVEEAKRKVA ARAREVVASG RGDIPDGGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01530.1 | 2e-18 | M-type_MADS family protein |