PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN16636.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 366aa    MW: 40079.5 Da    PI: 6.8427
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN16636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.41.1e-19285319135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+tkTp+WR gp g+ktLCnaCG++y++ +l
  PIN16636.1 285 CSHCGVTKTPQWRAGPLGSKTLCNACGVRYKSGRL 319
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MLYRTHHHPF LLTFNPFTHS SLSPHRLSSS SYPLQGMECV QGASKSGFGT ETPLKTAAFM  60
DDFWGVNGGP NGVSGDDLFV DELLDFSNDF SDAEEQQQQL EGQEEKKEQD KSETCSVSQD  120
KETAPENSLL SARDDFGSLP ESELSVPAEG LESLEWLSHF VEDSFSDYSL TGKLPPKLTE  180
KRPEPEITVK EQPCFTTPVQ TKARTKRART GVRVWPILSP SFTESSTSSS SSTSSTTSFS  240
PVNHLAFRSQ TGESSLGKPP AKKQKKKPAD PTAGGGAGAG QPRRCSHCGV TKTPQWRAGP  300
LGSKTLCNAC GVRYKSGRLL PEYRPACSPT FSSELHSNNH RKVLEMRRKK ELETEAAGLQ  360
QPVQSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36240.11e-47GATA family protein