PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN16269.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 230aa MW: 25845.3 Da PI: 8.592 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.1 | 3.6e-19 | 74 | 128 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA++l+L+ rqV vW+qNrRa+ k PIN16269.1 74 RKKLRLTKEQSRLLEESFRQNHTLNPKQKETLAEQLNLKPRQVEVWYQNRRARSK 128 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 117.2 | 9.6e-38 | 74 | 162 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+++++L+p++K++la++L+l+prqv+vW+qnrRAR k+kq+E+++e+Lkr++ +l+e+n++L+keveeLr+ PIN16269.1 74 RKKLRLTKEQSRLLEESFRQNHTLNPKQKETLAEQLNLKPRQVEVWYQNRRARSKLKQTEMECEYLKRWFGSLTEQNRKLQKEVEELRA 162 69*************************************************************************************94 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MENFPNSNSS CLELTIAMPG GFSSSPSLLS SGESGGNIMK EVPDINQIPS PGLTEEECME 60 EEDESPMNGG PAPRKKLRLT KEQSRLLEES FRQNHTLNPK QKETLAEQLN LKPRQVEVWY 120 QNRRARSKLK QTEMECEYLK RWFGSLTEQN RKLQKEVEEL RAMKVGQPHG GHHLPPTSTL 180 TMCPRCQRVT TTAPYDKGPT TTTAAITTTT NAATKMPFIR SRQSSAACYK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 131 | RRARSKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 7e-62 | HD-ZIP family protein |