PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN15694.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 154aa    MW: 17502.2 Da    PI: 10.2481
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN15694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.61.5e-1360110255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G r+++ +g+++ eIrdp     k  + +lg++ t+ee a a+++a+ kl+g
  PIN15694.1  60 RYRGMRRRP-WGKFAMEIRDP---DrKGSKLWLGTYETPEEPALAYDKAAFKLRG 110
                 7********.**********8...3245*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MNLAFLDSIQ DYLLSDFDLP QNLLCDNITT SVSDDEQISS KMVDAPAKSV SQVASVEWRR  60
YRGMRRRPWG KFAMEIRDPD RKGSKLWLGT YETPEEPALA YDKAAFKLRG SKARVNFPHL  120
VGSRVLEPTR VTKRSHNSMA PLNVPSKKMK MVVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132139TKRSHNSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-31ERF family protein