PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15621.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARF

Protein Properties

Length: 413aa MW: 45399.1 Da PI: 7.1786

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.8	5.9e-25	145	246	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++p++ ae++ +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + +++el+ PIN15621.1 145 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyDKQ-RPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSAFVSKKKLVSGDAVLFL--RGTDGELR 240 99**************************96433.45679*********************************************..4499999 PP EEEE-S CS B3 94 vkvfrk 99 ++v+r+ PIN15621.1 241 LGVRRA 246 ***996 PP
2	Auxin_resp	102.8	4.4e-34	269	350	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 ++++++++++F+++YnPra +se + +++k++k++++++s+G+Rfk + etedsserr+sG++vgvsd+dpvrWp+SkW++L PIN15621.1 269 VVNSIAMRKTFDICYNPRARSSEIIAPYHKFSKSFTHSFSPGTRFKTRSETEDSSERRCSGLIVGVSDADPVRWPGSKWKCL 350 678999***************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MMNGLIDLNA VDNEEEPASP SGSSPSTAVS ESVATSSSAF CMELWHACAG PLISLPKKGS 60 AVVYFPQGHV EHLPEHSAVA YDLPPHVFCR VIHVKLHADA ANDEVYAQVS LVPDQQIEQK 120 WREGVIAEVE DEDAGDVNKS TPHMFCKTLT ASDTSTHGGF SVPRRAAEDC FPPLDYDKQR 180 PSQELVAKDL HGVEWKFRHI YRGQPRRHLL TTGWSAFVSK KKLVSGDAVL FLRGTDGELR 240 LGVRRAAQVK SGATRLAQKI QQFNDIAAVV NSIAMRKTFD ICYNPRARSS EIIAPYHKFS 300 KSFTHSFSPG TRFKTRSETE DSSERRCSGL IVGVSDADPV RWPGSKWKCL LVRWDGTGGN 360 CLDRVSPWEI ELSGLVSGSN NLVLLGTKRS RAAFPSTKPD FQLSGDGNEA SDF

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MMNGLIDLNA VDNEEEPASP SGSSPSTAVS ESVATSSSAF CMELWHACAG PLISLPKKGS  60
AVVYFPQGHV EHLPEHSAVA YDLPPHVFCR VIHVKLHADA ANDEVYAQVS LVPDQQIEQK  120
WREGVIAEVE DEDAGDVNKS TPHMFCKTLT ASDTSTHGGF SVPRRAAEDC FPPLDYDKQR  180
PSQELVAKDL HGVEWKFRHI YRGQPRRHLL TTGWSAFVSK KKLVSGDAVL FLRGTDGELR  240
LGVRRAAQVK SGATRLAQKI QQFNDIAAVV NSIAMRKTFD ICYNPRARSS EIIAPYHKFS  300
KSFTHSFSPG TRFKTRSETE DSSERRCSGL IVGVSDADPV RWPGSKWKCL LVRWDGTGGN  360
CLDRVSPWEI ELSGLVSGSN NLVLLGTKRS RAAFPSTKPD FQLSGDGNEA SDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-165	ARF family protein