PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15505.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 768aa MW: 88204.8 Da PI: 7.981

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.2	4.1e-21	49	124	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+ YA++vGF++r+ + ++s+ +g++++r+fvCskeg++++ +rtgC a ++v+k ++gkw+++++++eHnH++ PIN15505.1 49 EFYSVYATQVGFKIRIGQLYRSRVDGSVISRRFVCSKEGFQTN--------------SRTGCPAFIRVQKVDSGKWVLANINKEHNHDFE 124 6*************************************987..............589*************************986 PP
2	FAR1	66.8	5.5e-21	200	275	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY++YA ++GF++r+ + +sk++g+it+r+fvCskeg++++ +r+gC a ++++++++g+w v++l++eHnHe+ PIN15505.1 200 KFYHTYAANIGFRIRIGQLFRSKHDGSITSRRFVCSKEGHQHP--------------SRVGCGAYMRIQRQESGRWIVDRLQKEHNHEFD 275 6************************************9998..............4899************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 768 aa Download sequence
MNREELGNLM AVRTKPGALV CNGHREDEGE SKMEPHVGLE FDSAEEAQEF YSVYATQVGF 60 KIRIGQLYRS RVDGSVISRR FVCSKEGFQT NSRTGCPAFI RVQKVDSGKW VLANINKEHN 120 HDFEPSDEIC PPRIQRKSFP TPRSSAGGAS RTGIRSHEDD SPAGVVDMKR LKKEEIEGVA 180 RPTGEPYKGL EFNSANEAYK FYHTYAANIG FRIRIGQLFR SKHDGSITSR RFVCSKEGHQ 240 HPSRVGCGAY MRIQRQESGR WIVDRLQKEH NHEFDTLTDP SRTPSVASKG YREEGSSVLE 300 NLDLVETNGA LSLVKRVRES NIGSDWYNLL LDYFQSRQAE DTGFFYAVEM REGKGMNIFW 360 ADARSRFSCA QFGDAIVFDT TYRRGSYSVP FASFVGVNHH RQPVLLGCVL IADESEESFT 420 WIFQAWVRAM SGCRPVSIIA DQDITIQHSI AKIFPGTHHR FSAWQILAKE QENLGALLSM 480 DAEFKYEYEA CIFQSQTATE FDSAWNMLMN KYNLRDNTWC KEMYRMRKSW VPLHIKGTFF 540 AGIPVDGSLK SYFTPILTSQ TPLNEFIIRY EKALEQRREE ERKEDFNSFN LQAVLHTKDP 600 IEEQCRRQYT ITMFKVFQKE LLECYSYVGI KINVEGAISR YLVQKCGNGD ERNTVAFNAS 660 NLNVNCSCKM FEFEGILCRH ALKVFQIMNI RELPSRYILH RWSKNAKYGI LRDADSGGGG 720 LQDFKPLMLW SLREEARNYI DAGAASLERY KLAFEMMQDG RRNLCWQN

Sequence ? help Back to Top

Protein Sequence Length: 768 aa Download sequence

MNREELGNLM AVRTKPGALV CNGHREDEGE SKMEPHVGLE FDSAEEAQEF YSVYATQVGF  60
KIRIGQLYRS RVDGSVISRR FVCSKEGFQT NSRTGCPAFI RVQKVDSGKW VLANINKEHN  120
HDFEPSDEIC PPRIQRKSFP TPRSSAGGAS RTGIRSHEDD SPAGVVDMKR LKKEEIEGVA  180
RPTGEPYKGL EFNSANEAYK FYHTYAANIG FRIRIGQLFR SKHDGSITSR RFVCSKEGHQ  240
HPSRVGCGAY MRIQRQESGR WIVDRLQKEH NHEFDTLTDP SRTPSVASKG YREEGSSVLE  300
NLDLVETNGA LSLVKRVRES NIGSDWYNLL LDYFQSRQAE DTGFFYAVEM REGKGMNIFW  360
ADARSRFSCA QFGDAIVFDT TYRRGSYSVP FASFVGVNHH RQPVLLGCVL IADESEESFT  420
WIFQAWVRAM SGCRPVSIIA DQDITIQHSI AKIFPGTHHR FSAWQILAKE QENLGALLSM  480
DAEFKYEYEA CIFQSQTATE FDSAWNMLMN KYNLRDNTWC KEMYRMRKSW VPLHIKGTFF  540
AGIPVDGSLK SYFTPILTSQ TPLNEFIIRY EKALEQRREE ERKEDFNSFN LQAVLHTKDP  600
IEEQCRRQYT ITMFKVFQKE LLECYSYVGI KINVEGAISR YLVQKCGNGD ERNTVAFNAS  660
NLNVNCSCKM FEFEGILCRH ALKVFQIMNI RELPSRYILH RWSKNAKYGI LRDADSGGGG  720
LQDFKPLMLW SLREEARNYI DAGAASLERY KLAFEMMQDG RRNLCWQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein