PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN15285.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 370aa MW: 41600.6 Da PI: 7.3942

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN15285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.7	4.4e-18	29	118	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f+k+l++s+ + + l lpkkf+++h + + t++l de+ ++++ k+++rk++ l++GW++F a++L egD +vF+l++ +f +v ++r PIN15285.1 29 FLKQLLKSHLSGKFYLGLPKKFCDAHLPS--HDDTIVLVDENEQEYSTKYSVRKNR----LSGGWRGFSVAHKLLEGDALVFHLIEPCKF--KVYIVR 118 89**********************422..4459***********777777....**********************998888..777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MENHLNAISS ALDCSQGIQA NPLAEYPSFL KQLLKSHLSG KFYLGLPKKF CDAHLPSHDD 60 TIVLVDENEQ EYSTKYSVRK NRLSGGWRGF SVAHKLLEGD ALVFHLIEPC KFKVYIVRAG 120 KLTENDGTMD LQSYDFQNTM PISTVKIEDQ TKQNALIGEK GRRIYRNSLS VDGHQKKKKA 180 RSISDRKLIV DQAGNATAHF GSDVLESIRY SDSVLHFKDV KGFQDFKIQV DGLILDSEIP 240 TDLRTNSKLA VVMISETVEI ADAIRSANLA TSLHRFDCWE KTLKAFEDLG MKVGFLRDRL 300 HKLVSLLHES EVIESMITKR AEADEKIANF DTASLNVKGL IGNLEAGVKV LKLKNEKIGF 360 EFQDVAWAPW

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MENHLNAISS ALDCSQGIQA NPLAEYPSFL KQLLKSHLSG KFYLGLPKKF CDAHLPSHDD  60
TIVLVDENEQ EYSTKYSVRK NRLSGGWRGF SVAHKLLEGD ALVFHLIEPC KFKVYIVRAG  120
KLTENDGTMD LQSYDFQNTM PISTVKIEDQ TKQNALIGEK GRRIYRNSLS VDGHQKKKKA  180
RSISDRKLIV DQAGNATAHF GSDVLESIRY SDSVLHFKDV KGFQDFKIQV DGLILDSEIP  240
TDLRTNSKLA VVMISETVEI ADAIRSANLA TSLHRFDCWE KTLKAFEDLG MKVGFLRDRL  300
HKLVSLLHES EVIESMITKR AEADEKIANF DTASLNVKGL IGNLEAGVKV LKLKNEKIGF  360
EFQDVAWAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	4e-37	B3 family protein