PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN15218.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 219aa MW: 25458.3 Da PI: 4.643 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.4 | 2.5e-18 | 14 | 67 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q++ Le+ Fe ++++ e++ +LAk+l+L+ rqV +WFqNrRa++k PIN15218.1 14 KKRRLNPNQVQFLEKSFEVENKLEPERKVQLAKELNLQPRQVAIWFQNRRARYK 67 45689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 122.3 | 2.5e-39 | 13 | 104 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kkrrl+ +qv++LE+sFe e+kLeperKv+la+eL+lqprqva+WFqnrRAR+ktk lEk+y++Lk++yd+lk++ ++L ke+e++++e++ PIN15218.1 13 QKKRRLNPNQVQFLEKSFEVENKLEPERKVQLAKELNLQPRQVAIWFQNRRARYKTKLLEKEYDSLKANYDKLKADYDNLFKENEKMKTEVN 104 69*************************************************************************************99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MENCNEDFDG NFQKKRRLNP NQVQFLEKSF EVENKLEPER KVQLAKELNL QPRQVAIWFQ 60 NRRARYKTKL LEKEYDSLKA NYDKLKADYD NLFKENEKMK TEVNLLTEKL LKKEPRDPIS 120 PLDSEPKKDA ASSAKSDVFD SDSPHCTDGN HSAVLEPTAD SSHVFESDFS QEEDDSLSRS 180 LLPPSCFPKL EVESYDDLQP NSCNLGFPVQ DQGTWLWQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 7e-42 | HD-ZIP family protein |