PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN14275.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family BBR-BPC
Protein Properties Length: 302aa    MW: 34008.5 Da    PI: 9.7249
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN14275.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind318.52.1e-9713021301
   GAGA_bind   1 mdddgsre.rnkg.yye...........paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalll 86 
                 md++g ++ r++   y+           ++++ + +++ ++  +  e+da+i+er+ al+ekkaa+ erd a +qrd+a+ er++a+ erdn+++al++
  PIN14275.1   1 MDESGRENrRHRVdCYKvppwnvisqyqNKEQNAFHMNAKISMLCDEKDAAIKERDRALAEKKAALDERDAAIQQRDAAIVERDNAVRERDNAIAALQF 99 
                 8888888877777788888888888875334555569999988899***************************************************** PP

   GAGA_bind  87 venslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesade 185
                 +e +++  l +g + l+ t++     +++ ++++ + + l e+ +++a+p++  + ea++ ++k      +k+ + k++k+kk +e+ +++v++++   
  PIN14275.1 100 QESTMNALLTSGARGLKRTNHPT---NHHTSNVQSTDI-LWEQCITDAFPVSAVPGEATNIRTKT-----NKNVKMKSRKVKKMGEDLNRQVTTDG--- 186
                 **998888766666666655544...433355544433.4678889999*999888888776665.....45556678888888989999998888... PP

   GAGA_bind 186 rskaekksidl.vlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpv 283
                  skae++ + + ++n++s+Des +PvPvCsCtG++rqCYkWGnGGWqS+CCtt++S yPLP+++++r+aR++grKmS+++f++lL +Laa G+dls pv
  PIN14275.1 187 -SKAEWDAQHFgSMNQISFDESIMPVPVCSCTGVPRQCYKWGNGGWQSSCCTTSLSLYPLPQMPNKRHARMGGRKMSGSVFSRLLTRLAAGGHDLSIPV 284
                 .89********88************************************************************************************** PP

   GAGA_bind 284 DLkdhWAkHGtnkfvtir 301
                 DLk++WAkHGtn+++ti+
  PIN14275.1 285 DLKNYWAKHGTNRYITIK 302
                 *****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDESGRENRR HRVDCYKVPP WNVISQYQNK EQNAFHMNAK ISMLCDEKDA AIKERDRALA  60
EKKAALDERD AAIQQRDAAI VERDNAVRER DNAIAALQFQ ESTMNALLTS GARGLKRTNH  120
PTNHHTSNVQ STDILWEQCI TDAFPVSAVP GEATNIRTKT NKNVKMKSRK VKKMGEDLNR  180
QVTTDGSKAE WDAQHFGSMN QISFDESIMP VPVCSCTGVP RQCYKWGNGG WQSSCCTTSL  240
SLYPLPQMPN KRHARMGGRK MSGSVFSRLL TRLAAGGHDL SIPVDLKNYW AKHGTNRYIT  300
IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-104BBR-BPC family protein