PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13901.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HB-other

Protein Properties

Length: 520aa MW: 58105.2 Da PI: 8.5846

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59	8e-19	21	76	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ q++ Le+++++++yp+++++ +LA+++gLte+qV+ WF+ rR k+kk PIN13901.1 21 KKRIVKTRAQVQSLEKFYNEHKYPTESMKMQLAESIGLTEKQVSGWFCHRRLKDKK 76 89****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MGEESSEMHS EDDKVLQEKN KKRIVKTRAQ VQSLEKFYNE HKYPTESMKM QLAESIGLTE 60 KQVSGWFCHR RLKDKKLMNG EINATGRQDR SSGAVQDRGS GHRQDSCGST KQGDDRNFEV 120 REVESGRLTP KEFSAADLTY EHGSQHAGNY NRMSDASSGS SSSLRNMSGH QNGDPFDAAA 180 SRYQIPKFPG DLKAVKPRSG PSGYLKVKRQ VENASITAVK RQLGKHYVQD GPPLGVEFDP 240 LPPGAFESSM QDPDEETFYD GGDACPASPD VSKVRQNPKF DQGYEFKSSM ATYNSNIDGP 300 SFKTRRSGDI PNSYIPPKYK LKTSAPKNSA YYPSSDYLAE LPEGSARNIS GSESRDAYGT 360 RPRPDVEVMR TDSVYSHPNL QPYAGKLRGE HAESWRPKYN EVGTKISPVK NIENEYSNFA 420 MKGNEYYSSG DKGLPRRIIQ DGNMYPDKRI TIENRGAKIP FKNELIAPKR KREDFPQHQH 480 PRTSPAVDLA QKYQVVRSTA EVPSSFSVDE ESAETSSSVD

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MGEESSEMHS EDDKVLQEKN KKRIVKTRAQ VQSLEKFYNE HKYPTESMKM QLAESIGLTE  60
KQVSGWFCHR RLKDKKLMNG EINATGRQDR SSGAVQDRGS GHRQDSCGST KQGDDRNFEV  120
REVESGRLTP KEFSAADLTY EHGSQHAGNY NRMSDASSGS SSSLRNMSGH QNGDPFDAAA  180
SRYQIPKFPG DLKAVKPRSG PSGYLKVKRQ VENASITAVK RQLGKHYVQD GPPLGVEFDP  240
LPPGAFESSM QDPDEETFYD GGDACPASPD VSKVRQNPKF DQGYEFKSSM ATYNSNIDGP  300
SFKTRRSGDI PNSYIPPKYK LKTSAPKNSA YYPSSDYLAE LPEGSARNIS GSESRDAYGT  360
RPRPDVEVMR TDSVYSHPNL QPYAGKLRGE HAESWRPKYN EVGTKISPVK NIENEYSNFA  420
MKGNEYYSSG DKGLPRRIIQ DGNMYPDKRI TIENRGAKIP FKNELIAPKR KREDFPQHQH  480
PRTSPAVDLA QKYQVVRSTA EVPSSFSVDE ESAETSSSVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-67	HB-other family protein